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Thematic Workshop
BIOTECHNOLOGY: Systems Biologó
of Plants
Scientific Coordinator: Prof. Konstantin Skryabin, Director,
Centre "Bioengineering", Russian Academy of Sciences, Moscow, Russian Federation
Co-Chair: Prof. Igor Tikhonovich, Director, All-Russia
Research Institute for Agricultural Microbiology, Russian Academy of Agricultural Sciences, St.Petersburg, Russian Federation
Working language: English Room
445
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11.30 – 13.00
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Morning session:
Opening, Workshop Framework and Objectives
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11.30 – 11.55
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Prof. Ralf Hofestädt, University Bielefeld AG, Bioinformatics and Medical Informatics,
Bielefeld, Germany
Using Petri nets for the integration and simulation of metabolic
networks
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11.55 –
12.15
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Dr. Vladimir Ivanisenko, Institute of Cytology and Genetics, Siberian Branch of RAS, Novosibirsk, Russian Federation
Bioinformatics and its application in addressing the challenges
of biotechnology and medicine
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12.15 –
12.35
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Dr. Falk Schreiber, Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben,
Germany
Bioinformatics at the IPK Gatersleben
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12.35 –
13.00
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Dr. Uta Bohnebeck, TTZ Bremerhaven, Bremerhaven, Germany
Bioinformatics at TTZ Bremerhaven
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13.00 – 14.00
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Lunch break
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14.00 – 18.00
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Afternoon session
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14.00 – 14.15
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Prof. François Kepes, Epigenomics Project, Genopole® ÉVRY, French National Center
for Scientific Research, CNRS, France
The current status of Systems Biology in French CNRS
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14.15 – 14.30
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Dr. Boris Sorochynskyi, Institute of Cell Biology and Genetic Engineering, Kiev, Ukraine
Short introduction to the Institute of Cell Biology and Genetic
Engineering
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14.30 – 14.45
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Dr. Ivelin Iliev Rizov, AgroBioInstitute, Metabolomics unit, Sofia, Bulgaria
The plant biotehnology in Bugaria and its future
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14.45 – 15.00
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Prof. Eugene Korotkov, Centre «Bioengineering», RAS, Moscow, Russian Federation
Annotation of bacterial genomes with the help of 4-space dynamic
programming
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15.00 – 15.15
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Prof. Lothar Willmitzer, MPI of Molecular Plant Physiology, Potsdam, Germany
Metabolomics as a tool in systems biology
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15.15 – 15.30
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Prof. Heribert Hirt, URGV Plant Genomics, Evry, France
From phosphoproteomics to systems biology of signal transduction
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15.30 – 15.45
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Dr. Staffan Persson, MPI for Molecular Plant Physiology, Potsdam, Germany and Alisdair Fernie,
MPI for Molecular Plant Physiology, Potsdam, Germany
The importance of bottlenecks in protein networks: correlation with
gene essentiality and expression dynamics
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15.45 – 16.00
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Coffee break
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16.00 – 16.20
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Prof. Konstantin Skryabin, Centre "Bioengineering", Russian Academy of Sciences,
Moscow, Russian Federation
Plants for future: the views from Russia
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16.20 – 16.40
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Prof. Igor Tikhonovich, All-Russia Institute for Agricultural Microbiology, RAAS, St. Petersburg, Russian Federation
Signal exchange between plants and microbes in supplying of system
adaptations in plants
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16.40 – 17.00
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Dr. Mikhail Semenov, Centre for Mathematical and Computational Biology, Rothamsted Research, United
Kingdom
Systems Biology at RRes
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17.00 – 17.15
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Dr. Alexander Ignatov, Centre «Bioengineering», RAS, Moscow, Russian Federation
Genetic variability of plant pathogenic bacteria in Russian Federation
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17.15 – 17.30
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Dr. Patrizio Arrigo, CNR ISMAC, Genova, Italy
Analysis polymorphism of miRNA and their action on gene expression
in multifactorial disease.
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17.30 – 17.45
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Dr. Andrei Zinovyev, Service Bioinformatique, Institut Curie, Paris, France
Projects and tools of Institute Curie in the field of Systems Biology
of Cancer
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17.45
– 18.00
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Conclusions and closing of the session
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Announcement
